The rs9402373 polymorphism of CTGF gene may not be related to inflammatory bowel disease susceptibility in Chinese population based on ARMS-PCR genotyping
نویسندگان
چکیده
BackgroundIt has been confirmed that the connective tissue growth factor (CTGF) gene rs9402373 polymorphism is associated with fibrotic and inflammatory diseases. However, studies on relationship between polymorphisms in CTGF bowel disease (IBD) remain rare. Therefore, aim of this study was to assess association IBD susceptibility a Chinese population.Materials methodsTo establish an amplification refractory mutation system (ARMS) PCR technology for genotyping polymorphism, we designed two specific forward primers wild mutant types by placing allele-specific nucleotide at penultimate position ‘3′ end primer. Then, 10 samples were randomly selected rechecked DNA sequencing verify accuracy method. We further used established method detect specimens collected from 191 patients disease, including 120 Crohn's (CD) 71 ulcerative colitis (UC), 110 healthy Han individuals.ResultsWe successfully ARMS-PCR genotyping, results completely consistent sequencing. The G allele frequencies UC CD cases 38.03% 43.75%, respectively, controls, they 41.82%. No significant difference found minor or control groups (P = 0.473, P 0.676). Genotype analysis demonstrated there no risk regardless inheritance mode > 0.05).ConclusionsIn preliminary study, developed simple, efficient cost-effective polymorphism. may not be related population.
منابع مشابه
Lack of Association between Interleukin 23R (IL-23R) rs10889677 Polymorphism and Inflammatory Bowel Disease Susceptibility In an Iranian Population
Background: Inflammatory bowel diseases (IBDs), which include ulcerative colitis (UC) and Crohn’s disease (CD), are inflammatory disorders that affect the gastrointestinal tract. A combination of inflammatory cytokines has an important role in IBD development. Genome-wide association studies have shown that polymorphisms in the interleukin-23R gene (IL-23R) increase susceptibility to IBD....
متن کاملMAP3K1 May be a Promising Susceptibility Gene for Type 2 Diabetes Mellitus in an Iranian Population
Considering that MAPK (mitogen- activated protein kinase) signaling pathway has an important role in the progression of inflammatory cytokine secretion in type 2 diabetes mellitus (T2DM), we have recently investigated the reported genetic polymorphism from genome wide association study in MAP3K1 (mitogen-activated protein kinase kinase kinase 1) in diabetes as an important member of MAPK signal...
متن کاملINFLAMMATORY BOWEL DISEASE DLG5 variants do not influence susceptibility to inflammatory bowel disease in the Scottish population
Introduction: Recent data have suggested that specific haplotypic variants of the DLG5 gene on chromosome 10q23 may be associated with susceptibility to inflammatory bowel disease (IBD) in Germany. Haplotype D, notably characterised by the presence of a GRA substitution at nucleotide 113, was associated with susceptibility to Crohn’s disease (CD) whereas an extended haplotype A conferred protec...
متن کاملDLG5 variants do not influence susceptibility to inflammatory bowel disease in the Scottish population.
INTRODUCTION Recent data have suggested that specific haplotypic variants of the DLG5 gene on chromosome 10q23 may be associated with susceptibility to inflammatory bowel disease (IBD) in Germany. Haplotype D, notably characterised by the presence of a G-->A substitution at nucleotide 113, was associated with susceptibility to Crohn's disease (CD) whereas an extended haplotype A conferred prote...
متن کاملHemophagocytic Lymphohistocytosis in the Chinese Han Population May Be Associated with an STXBP2 Gene Polymorphism
STUDY PURPOSE Hemophagocytic lymphohistiocytosis (HLH) is a life-threatening disease of severe hyperinflammation caused by uncontrolled proliferation of activated lymphocytes and macrophages. In this study, we aimed to explore the genetic factors involved in the pathogenesis of both acquired and familial type HLH. METHOD The ION TORRENT semi-conductor sequencing method was used to sequence sa...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Heliyon
سال: 2023
ISSN: ['2405-8440']
DOI: https://doi.org/10.1016/j.heliyon.2023.e17003